Picrocrocin

Molecular & Flavor Profile
Common name: Picrocrocin
IUPAC name: (4R)-2,6,6-trimethyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycyclohexene-1-carbaldehyde
SMILES: CC1=C(C(CC(C1)OC2C(C(C(C(O2)CO)O)O)O)(C)C)C=O
CAS: 138-55-6
Flavor Profile: bitter
FEMA Flavor Profile: Not Available
FEMA Number: Not Available
Taste: Not Available
Odor: Not Available
Functional Groups: carbonyl compound, aldehyde, acetal, hydroxy compound, alcohol, primary alcohol, secondary alcohol, 1, 2-diol, alkene, heterocyclic compound
View JSmol
Search Similar in FlavorDB ZINC Similarity Search

External IDs  

PubChem ID: 130796
FooDB ID: NA
SuperSweet ID: NA
BitterDB ID: 405

Download as:
Mol2 2D Image SDF JSON

Entities that contain Picrocrocin

  • This compound is Naturally occurring but the source is not available

Physicochemical Properties

  • Molecular weight: 330.377 g/mol
  • HBD count: 4
  • HBA count: 7
  • Number of rotatable bonds: 4
  • Complexity: 473.0
  • Topological Polor Surface Area: 116.0 A^2
  • Monoisotopic Mass: 330.168 g/mol
  • Exact Mass: 330.168 g/mol
  • XlogP: -0.5
  • Charge: 0 C(coulomb)
  • Heavy Atom Count: 23
  • Atom Stereocenter Count: 6
  • Defined Atom Stereocenter Count: 6
  • Undefined Atom Stereocenter Count: 0
  • Bond Stereocenter Count: 0
  • Defined Bond Stereocenter Count: 0
  • Undefined Bond Stereocenter Count: 0
  • Isotope Atom Count: 0
  • Covalently Bonded Unit Count: 1
  • InChI: InChI=1S/C16H26O7/c1-8-4-9(5-16(2,3)10(8)6-17)22-15-14(21)13(20)12(19)11(7-18)23-15/h6,9,11-15,18-21H,4-5,7H2,1-3H3/t9-,11-,12-,13+,14-,15-/m1/s1
  • Volume 3D: 245.7

Nomenclature

  • Common name: Picrocrocin
  • IUPAC name: (4R)-2,6,6-trimethyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycyclohexene-1-carbaldehyde
  • CAS numbers: 138-55-6
  • SMILES: CC1=C(C(CC(C1)OC2C(C(C(C(O2)CO)O)O)O)(C)C)C=O
  • InChI: InChI=1S/C16H26O7/c1-8-4-9(5-16(2,3)10(8)6-17)22-15-14(21)13(20)12(19)11(7-18)23-15/h6,9,11-15,18-21H,4-5,7H2,1-3H3/t9-,11-,12-,13+,14-,15-/m1/s1

Description

  • Flavor profile: bitter
  • Functional groups: carbonyl compound, aldehyde, acetal, hydroxy compound, alcohol, primary alcohol, secondary alcohol, 1, 2-diol, alkene, heterocyclic compound
  • Bitter compound: Yes

Natural Occurence

  • Occurrence summary: Naturally occurring
  • Source entity count: 0

Composition

  • Molecular formula: C16H26O7
  • Molecular composition: C: 0.582, H: 0.079, O: 0.339
  • Number of atoms: 23

ADMET Properties

  • ADMET Solubility: -0.82
  • ADMET Solubility Level: 4.0
  • ADMET BBB Level: 4.0
  • ADMET EXT Hepatotoxic: -12.9216
  • ADMET EXT Hepatotoxic prediction md: False
  • ADMET EXT Hepatotoxic applicability: All properties and OPS components are within expected ranges.
  • ADMET EXT Hepatotoxic applicability md: 10.4428
  • ADMET EXT Hepatotoxic applicability mdpvalue: 0.031247700000000003
  • ADMET Absorption Level: 0.0
  • ADMET EXT PPB: -16.8345
  • ADMET EXT PPB prediction: False
  • ADMET EXT PPB applicability: All properties and OPS components are within expected ranges.
  • ADMET EXT PPB applicability md: 11.7356
  • ADMET EXT PPB applicability mdpvalue: 0.16356099999999998
  • ADMET unknown AlogP98: 0.0
  • ADMET AlogP98: -0.175
  • ADMET PSA 2D: 118.42200000000001

2D/3D Properties

  • Number of atoms: 23
  • Molecular formula: C16H26O7
  • Molecular composition: C: 0.582, H: 0.079, O: 0.339
  • Molecular mass: 330.168 g/mol
  • Energy: 27.55 Kcal/M
  • AlogP: -0.175
  • LogD: -0.175
  • Molecular Solubilty: -1.729
  • Number of aromatic bonds: 0
  • Number of aromatic rings: 0
  • Number of H acceptor: 7
  • Number of H acceptor lipinski: 7
  • Number of H donor: 4
  • Number of H donor lipinski: 4
  • Number of H bonds: 0
  • Number of rings: 2
  • Surface area(SA): 350.36 A^2
  • Molecular SASA(Solvent accessible SA): 506.598 A^2
  • Radius of gyration: 2.69244 A
  • Molecular 3D SASA: 498.05400000000003 A^2

Details of "Molecular & Flavor Profile" and physicochemical properties were obtained from PubChem Substance & Compound Databases, FooDB, Flavornet, SuperSweet, and BitterDB. 2D/3D and ADMET properties were obtained with Discovery Studio.