CHEMBL564435

Molecular & Flavor Profile
Common name: CHEMBL564435
IUPAC name: [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [2-azidoethoxy(hydroxy)phosphoryl] hydrogen phosphate
SMILES: C1=NC2=C(C(=N1)N)N=CN2C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OCCN=[N+]=[N-])O)O
CAS: Not Available
Flavor Profile: sweet-like
FEMA Flavor Profile: Not Available
FEMA Number: Not Available
Taste: Not Available
Odor: Not Available
Functional Groups: hydroxy compound, alcohol, secondary alcohol, 1, 2-diol, amine, primary amine, primary aromatic amine, azide, phosphoric acid derivative, phosphoric acid ester, aromatic compound, heterocyclic compound
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External IDs  

PubChem ID: 45273775
FooDB ID: NA
SuperSweet ID: 30941
BitterDB ID: NA

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Mol2 2D Image SDF JSON

Entities that contain CHEMBL564435

  • This compound is Synthetic

Physicochemical Properties

  • Molecular weight: 576.248 g/mol
  • HBD count: 6
  • HBA count: 19
  • Number of rotatable bonds: 12
  • Complexity: 973.0
  • Topological Polor Surface Area: 283.0 A^2
  • Monoisotopic Mass: 576.028 g/mol
  • Exact Mass: 576.028 g/mol
  • XlogP: -4.3
  • Charge: 0 C(coulomb)
  • Heavy Atom Count: 36
  • Atom Stereocenter Count: 4
  • Defined Atom Stereocenter Count: 4
  • Undefined Atom Stereocenter Count: 0
  • Bond Stereocenter Count: 0
  • Defined Bond Stereocenter Count: 0
  • Undefined Bond Stereocenter Count: 0
  • Isotope Atom Count: 0
  • Covalently Bonded Unit Count: 1
  • InChI: InChI=1S/C12H19N8O13P3/c13-10-7-11(16-4-15-10)20(5-17-7)12-9(22)8(21)6(31-12)3-30-35(25,26)33-36(27,28)32-34(23,24)29-2-1-18-19-14/h4-6,8-9,12,21-22H,1-3H2,(H,23,24)(H,25,26)(H,27,28)(H2,13,15,16)/t6-,8-,9-,12-/m1/s1
  • Volume 3D: 372.4

Nomenclature

  • Common name: CHEMBL564435
  • IUPAC name: [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [2-azidoethoxy(hydroxy)phosphoryl] hydrogen phosphate
  • SMILES: C1=NC2=C(C(=N1)N)N=CN2C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)OCCN=[N+]=[N-])O)O
  • InChI: InChI=1S/C12H19N8O13P3/c13-10-7-11(16-4-15-10)20(5-17-7)12-9(22)8(21)6(31-12)3-30-35(25,26)33-36(27,28)32-34(23,24)29-2-1-18-19-14/h4-6,8-9,12,21-22H,1-3H2,(H,23,24)(H,25,26)(H,27,28)(H2,13,15,16)/t6-,8-,9-,12-/m1/s1

Description

  • Flavor profile: sweet-like
  • Functional groups: hydroxy compound, alcohol, secondary alcohol, 1, 2-diol, amine, primary amine, primary aromatic amine, azide, phosphoric acid derivative, phosphoric acid ester, aromatic compound, heterocyclic compound
  • Sweet classification: Sweet-like
  • Bitter compound: No

Natural Occurence

  • Occurrence summary: Synthetic
  • Source entity count: 0

Composition

  • Molecular formula: C12H19N8O13P3
  • Molecular composition: C: 0.250, H: 0.033, N: 0.194, O: 0.361, P: 0.161
  • Number of atoms: 36

ADMET Properties

  • ADMET Solubility: -6.15
  • ADMET Solubility Level: 1.0
  • ADMET BBB Level: 4.0
  • ADMET EXT Hepatotoxic: 6.13428
  • ADMET EXT Hepatotoxic prediction md: True
  • ADMET EXT Hepatotoxic applicability: OPS PC3 out of range. Value: 7.4337. Training min, max, SD, explained variance: -6.1313, 7.1658, 2.261, 0.0637.
    Unknown FCFP_2 feature: 13: [*]=[N-]
    Unknown FCFP_2 feature: -1623794309: [*]C([*])N=[N+]=[*]
    Unknown FCFP_2 feature: 1601641541: [*]N=[N+]=[N-]
    Unknown FCFP_2 feature: 1311280392: [*]=[N+]=[N-]
  • ADMET EXT Hepatotoxic applicability md: 13.4947
  • ADMET EXT Hepatotoxic applicability mdpvalue: 1.4949000000000002e-07
  • ADMET Absorption Level: 3.0
  • ADMET EXT PPB: -33.323
  • ADMET EXT PPB prediction: False
  • ADMET EXT PPB applicability: OPS PC4 out of range. Value: -6.3339. Training min, max, SD, explained variance: -6.3132, 7.1486, 2.357, 0.0459.
    Unknown FCFP_2 feature: 1281526724: [*]OP(=O)(O)O[*]
  • ADMET EXT PPB applicability md: 16.3219
  • ADMET EXT PPB applicability mdpvalue: 1.9780000000000003e-10
  • ADMET unknown AlogP98: 2.0
  • ADMET AlogP98: -1.847
  • ADMET PSA 2D: 300.56

2D/3D Properties

  • Number of atoms: 36
  • Molecular formula: C12H19N8O13P3
  • Molecular composition: C: 0.250, H: 0.033, N: 0.194, O: 0.361, P: 0.161
  • Molecular mass: 576.028 g/mol
  • Energy: 246.99 Kcal/M
  • AlogP: -1.724
  • LogD: -6.233
  • Molecular Solubilty: 2.006
  • pKa: 1.4
    2.04
    3.69
    4.55
  • Number of aromatic bonds: 10
  • Number of aromatic rings: 2
  • Number of H acceptor: 19
  • Number of H acceptor lipinski: 21
  • Number of H donor: 6
  • Number of H donor lipinski: 7
  • Number of H bonds: 0
  • Number of rings: 3
  • Surface area(SA): 508.64 A^2
  • Molecular SASA(Solvent accessible SA): 695.1619999999999 A^2
  • Radius of gyration: 3.97065 A
  • Molecular 3D SASA: 636.8430000000001 A^2

Details of "Molecular & Flavor Profile" and physicochemical properties were obtained from PubChem Substance & Compound Databases, FooDB, Flavornet, SuperSweet, and BitterDB. 2D/3D and ADMET properties were obtained with Discovery Studio.