Publications

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  1. Mansi Goel and Ganesh Bagler*, "Computational gastronomy: A data science approach to food", Journal of Biosciences (2022). Springer
  2. Yash Agarwal, Devansh Batra and Ganesh Bagler*, "Building Hierarchically Disentangled Language Models for Text Generation with Named Entities", Proceedings of the 28th International Conference on Computational Linguistics (2020). ACL Anthology
  3. Jushaan Kalra, Devansh Batra, Nirav Diwan and Ganesh Bagler*, "Nutritional profile estimation in cooking recipes", 2020 IEEE 36th International Conference on Data Engineering Workshops (ICDEW). ICDEW
  4. Nirav Diwan, Devansh Batra and Ganesh Bagler*, "A named entity based approach to model recipes", 2020 IEEE 36th International Conference on Data Engineering Workshops (ICDEW). ICDEW
  5. Tript Sharma, Utkarsh Upadhyay and Ganesh Bagler*, "Classification of Cuisines from Sequentially Structured Recipes", 2020 IEEE 36th International Conference on Data Engineering Workshops (ICDEW). ICDEW
  6. Tript Sharma, Utkarsh Upadhyay, Jushaan Kalra, Sakshi Arora, Saad Ahmad, Bhavay Aggarwal and Ganesh Bagler*, "Hierarchical clustering of world cuisines", 2020 IEEE 36th International Conference on Data Engineering Workshops (ICDEW). ICDEW
  7. Devansh Batra, Nirav Diwan, Utkarsh Upadhyay, Jushaan Singh Kalra, Tript Sharma, Aman Kumar Sharma, Dheeraj Khanna, Jaspreet Singh Marwah, Srilakshmi Kalathil, Navjot Singh, Rudraksh Tuwani and Ganesh Bagler*, "Recipedb: A resource for exploring recipes", Database , Oxford Academic (2020). Database Journal
  8. Rudraksh Tuwani, Somin Wadhwa and Ganesh Bagler*, "BitterSweet: building machine learning models for predicting the bitter and sweet taste of small molecules", Scientific reports , Nature (2019). Nature Journal
  9. Rudraksh Tuwani, Nutan Sahoo, Navjot Singh and Ganesh Bagler*, "Computational models for the evolution of world cuisines", 2019 IEEE 35th International Conference on Data Engineering Workshops (ICDEW). ICDEW
  10. Anupam Jain and Ganesh Bagler*, "Culinary evolution models for Indian cuisines", Physica A: Statistical Mechanics and its Applications (2018). Physica A
  11. Ganesh Bagler* and Navjot Singh*, "Data-driven investigations of culinary patterns in traditional recipes across the world", 2018 IEEE 34th International Conference on Data Engineering Workshops (ICDEW). ICDEW
  12. Rakhi NK, Rudraksh Tuwani, Jagriti Mukherjee and Ganesh Bagler*, "Data-driven analysis of biomedical literature suggests broad-spectrum benevolence of culinary herbs and spices", PLoS One (2018). PLoS One
  13. Somin Wadhwa, Aishwarya Gupta, Shubham Dokania, Rakesh Kanji and Ganesh Bagler*, "A hierarchical anatomical classification schema for prediction of phenotypic side effects", PLoS One (2018). PLoS One
  14. Neelansh Garg, Apuroop Sethupathy, Rudraksh Tuwani, Rakhi Nk, Shubham Dokania, Arvind Iyer, Ayushi Gupta, Shubhra Agrawal, Navjot Singh, Shubham Shukla, Kriti Kathuria, Rahul Badhwar, Rakesh Kanji, Anupam Jain, Avneet Kaur, Rashmi Nagpal and Ganesh Bagler*, "FlavorDB: a database of flavor molecules", Nucleic acids research (2018). Nucleic acids research, Oxford University Press
  15. Rakhi Nk, Rudraksh Tuwani, Neelansh Garg, Jagriti Mukherjee and Ganesh Bagler*, "SpiceRx: an integrated resource for the health impacts of culinary spices and herbs", bioRxiv (2018). bioRxiv
  16. Rahul Badhwar and Ganesh Bagler*, "Robust Sigmoidal Control Response of C. elegans Neuronal Network", International Joint Conference on Rough Sets (2017). Springer
  17. Vandana Ravindran, V. Sunitha, and Ganesh Bagler*, "Identification of critical regulatory genes in cancer signaling network using controllability analysis", Physica A: Statistical Mechanics and its Applications (2017). Open Access Journal
  18. Rahul Badhwar and Ganesh Bagler*, "A distance constrained synaptic plasticity model of C. elegans neuronal network", Physica A (Accepted, 2016). arXiv:1603.03867[q-bio.NC]
  19. Megha Singh, Rahul Badhwar and Ganesh Bagler*, "Graph theoretical biomarkers for schizophrenic brain functional networks", International Conference on Signal Processing and Communication (Accepted, 2016).
  20. Vandana Ravindran, V Sunitha and Ganesh Bagler*, "Controllability of human cancer signaling network-- Signaling as a paradigm for disease control through drug-gene interactions", International Conference on Signal Processing and Communication (Accepted, 2016).
  21. Shivalika Pathania*, Ganesh Bagler* and Paramvir Singh Ahuja, "Differential network analysis reveals evolutionary complexity in secondary metabolism of Rauvolfia serpentina over Catharanthus roseus", Frontiers in Plant Science, 7, 1229 (2016). Open Access Article
  22. Sneha Pande and Ganesh Bagler*, "A data and information driven discovery framework to bridge traditional and modern medicine", Advanced Techniques in Biology and Medicine, 3:141 (2015). Open Access
  23. Rahul Badhwar and Ganesh Bagler*, "Control of neuronal network in Caenorhabditis elegans", PLoS ONE, 10(9): e0139204 (2015). Open Access on PLoS ONE
  24. Anupam Jain^, Rakhi NK^, and Ganesh Bagler*, "Analysis of food pairing in regional cuisines of India", PLoS ONE, 10(10): e0139539 (2015). ^Equal contribution. Open Access on PLoS ONE
  25. Rakesh Kanji, Abhinav Sharma, Ganesh Bagler*, "Phenotypic side effects prediction by optimizing correlation with chemical and target profiles of drugs", Molecular Biosystems (Royal Society of Chemistry), 11, 2900-2906 (2015). Article Link
  26. Shivalika Pathania, SM Ramakrishnan, Vinay Randhawa, and Ganesh Bagler*, "SerpentinaDB: a database of plant-derived molecules of Rauvolfia serpentina", BMC Complementary and Alternative Medicine, 15(262) (2015). Article Link | Serpentina DB (Now ported to IIIT-Delhi Servers)
  27. Shivalika Pathania, SM Ramakrishnan, Ganesh Bagler*, "Phytochemica: A platform to explore phytochemicals of medicinal plants", Database (Oxford University Press) (accepted, July 2015). Article Link | Pytochemica (Now ported to IIIT-Delhi Servers)
  28. K. Dubey et. al., "Tyrosine and tryptophan coated gold nanoparticles inhibit amyloid aggregation of insulin", Amino Acids, (21 July 2015). Journal Link
  29. S. Perumal et. al., "Capsaicin suppresses fibril formation of type I collagen and increases tendon's stability", European Biophysical Journal, 44(1-2) (2015). Journal Link
  30. Vivek Dogra, Ganesh Bagler* and Y Sreenivasulu*, "Re-analysis of protein data reveals the germination pathway and up accumulation mechanism of cell wall hydrolases during the radicle protrusion step of seed germination in Podophyllum hexandrum- a high altitude plant", Frontiers in Plant Science, 6, 874 (2015). Open Access Article
  31. Reena Yadav, Mayur Ghatge, Kirankumar Hiremath and Ganesh Bagler*, "Numerical study of variable lung ventilation strategies", Chapter 26, pp 299-306, Systems Thinking Approach for Social Problems, Lecture Notes in Electrical Engineering (2013). arXiv:1509.05163[q-bio.QM]
  32. Shivalika Pathania, Vinay Randhawa, and Ganesh Bagler*, "Prospecting for novel plant-derived molecules of Rauvolfia serpentina as inhibitors of Aldose Reductase, a potent drug target for diabetes and its complications", PLoS ONE, 8(4): e61327 (2013). arXiv | Open Access on PLoS ONE | Manuscript PDF | Supplementary Table: R. serpentina PDMs Dataset
  33. Vinay Randhawa, Purnima Sharma, Shashi Bhushan and Ganesh Bagler*, "Identification of key nodes of Type 2 Diabetes Mellitus protein interactome and study of their interactions with phloridzin", OMICS: A Journal of Integrative Biology, 17(6), 302-317 (June 2013). OMICS: Journal Link | Manuscript PDF | Supplementary Data PDF
  34. Shikha Vashisht and Ganesh Bagler*, "An approach for the identification of targets specific to bone metastasis using cancer genes interactome and gene ontology analysis", PLoS ONE, 7(11): e49401 (2012). arXiv:1112.1510v2 | Open Access on PLoS ONE | Manuscript PDF
  35. Vinay Randhawa and Ganesh Bagler*, "Identification of SRC as a potent drug target and its novel leads, for Asthma, using integrative approach of protein interactome analysis and in silico drug discovery", OMICS: A Journal of Integrative Biology, 16 (10), 512-526 (26 Sept 2012) OMICS: Journal Link | Manuscript PDF | Supplementary Data PDF
  36. Arun Kumar, Som Dutt, Ganesh Bagler, Paramvir Singh Ahuja, Sanjay Kumar, "Engineering a thermo-stable superoxide dismutase functional at sub-zero to >50 degree celcius, which also tolerates autoclaving", Scientific Reports (Nature Publishing Group), 2, 387, 1-8 (30 April 2012). DOI:10.1038/srep00387; Manuscript PDF | Supplementary Data PDF | Open Access: http://www.nature.com/srep/2012/120430/srep00387/full/srep00387.html
  37. Ganesh Bagler*, "Complex Network Models of Protein Structures -- Structural correlates of biophysical properties", Lambert Academic Publishing (Germany), ISBN: 978-3-8433-5860-6 (2010; BOOK).
  38. Michael Lappe, Ganesh Bagler, Ioannis Fillipis, Henning Stehr, Jose M Duarte, and Sathyapriya Rajagopal, "Designing evolvable libraries using multi-body potentials", Current Opinion in Biotechnology, (COVER-PAGE ARTICLE), 20, 437-446 (2009). Manuscript PDF
  39. Ganesh Bagler and Somdatta Sinha, "Assortative mixing in protein Contact Networks and protein folding kinetics", Bioinformatics, 23, 14, 1760-1767 (2007). Bioinformatics | PDF | arxiv.org/abs/0711.2723
  40. Ganesh Bagler* and Somdatta Sinha, "Network properties of protein Structures", Physica A, 346, 27-33 (2005). Physica A | arXiv:q-bio.MN/0408009
  41. Ganesh Bagler*, "Analysis of Airport Network of India as a Complex Weighted Network", Physica A, 387, Issue 12, 2972-2980 (2008). Physica A | arXiv:cond-mat/0409773
  42. Ganesh Bagler*, "Complex network view of performance and risks on airport networks", Nova Science Publishers, USA, ISBN: 978-1-60692-393-1 (2009). arxiv.org/abs/0805.0924
  43. Ganesh Bagler*, "Modeling Protein Contact Networks" | PhD Thesis (December 2006). arxiv.org/abs/0711.2616
  44. Ganesh Bagler and Somdatta Sinha, "The Role of Host Migration on Host-Parasite Population Dynamics", in Proceedings of the Second Conference on Nonlinear Systems and Dynamics, 37-40 (2005). PDF
  45. Hemant Dixit, Ganesh Bagler, and Somdatta Sinha, "Modelling the Host-Parasite Interaction", in Proceedings of the First Conference on Nonlinear Systems and Dynamics, 321-324 (2003). PDF
  46. Ganesh Bagler, Wei-chao Chen, Jia-xin Cui, Sutirth Dey, W. Tyler Gibson, Vuk Milosevic, Daniel Rosenbloom, and Jiang Zhang (in alphabetical order), "Non-verbal human communication under varying levels of restrictions: An empirical and computational investigation of Password and Gasekitomu games," SFI CSSS Student Papers, Beijing (2005). PDF
  47. Samraat Pawar, Oskar Burger, Brian Hallmark, Ganesh Bagler, Frank Wang, and Xue Fu, "Evolution of Food-web Networks in Fluctuating Environments," SFI CSSS Student Papers, Beijing (2005). PDF